Record:   Prev Next
書名 The Challenges of systems biology [Electronic Resource] : community efforts to harness biological complexity / edited by Gustavo Stolovitzky, Pascal Kahlem, Andrea Califano
出版項 Hoboken, N.J. : Wiley InterScience, 2009
國際標準書號 9781573317511
book jacket
說明 1 online resource (xii, 316 p.) : ill
系列 Annals of the New York Academy of Sciences, 0077-8923 ; v. 1158
Annals of the New York Academy of Sciences ; v. 1158
附註 "The volume is divided into two parts. Part I features two papers selected from the ENFIN-DREAM conference, followed by papers selected from the DREAM2 conference" which took place in Madrid at the Spanish National Cancer Research Centre (CNIO), April 28-29, 2008 and the DREAM2 meeting sponsored by the New York Academy of Sciences, December 3-4, 2007 --pref
"The volume is the result of the Second Dialogue on Reverse Engineering Assessment and Methods (DREAM2) Challenges, posed to the systems biology community between July and October, 2007; the DREAM2 Conference, held on December 3-4, 2007 at the New York Academy of Sciences in New York; and the ENFIN-DREAM Conference, Assessment of Computational Methods in Systems Biology, held on April 28-29, 2008 in Madrid, Spain"--P. v
Includes bibliographical references and index
Ranking genes by their co-expression to subsets of pathway members / Priit Adler ... [et al.] -- Creating reference datasets for systems biology applications using text mining / Martin Krallinger, Ana María Rojas, Alfonso Valencia -- The condition-dependent transcriptional network in Escherichia coli / Karen Lemmens ... [et al.] -- Reverse-engineering transcriptional modules from gene expression data / Tom Michoel ... [et al.] -- Specification of spatial relationships in directed graphs of cell signaling networks / Azi Lipshtat, Susana R. Neves, Ravi Iyengar -- Uncovering metabolic objectives pursued by changes of enzyme levels / Sabrina Hoffmann, Hermann-Georg Holzhütter -- Modeling of gene regulatory network dynamics using threshold logic / Tejaswi Gowda, Sarma Vrudhula, Seungchan Kim -- Global robustness and identifiability of random, scale-free, and small-world networks / Yunchen Gong, Zhaolei Zhang -- The five-gene-network data analysis with local causal discovery algorithm using causal Bayesian networks / Changwon Yoo, Erik M. Brilz -- Combining multiple results of a reverse-engineering algorithm: application to the DREAM five-gene network challenge / Daniel Marbach, Claudio Mattiussi, Dario Floreano -- Network inference by combining biologically motivated regulatory constraints with penalized regression / Fabio Parisi, Heinz Koeppl, Felix Naef -- A gene network simulator to assess reverse engineering algorithms / Barbara Di Camillo, Gianna Toffolo, Claudio Cobelli -- A network inference workflow applied to virulence-related processes in Salmonella typhimurium / Ronald C. Taylor ... [et al.] -- Lessons from the DREAM2 challenges: a community effort to assess biological network inference / Gustavo Stolovitzky, Robert J. Prill, Andrea Califano -- DREAM2 challenge: integrated multi-array supervised learning algorithm for BCL6 transcriptional targets prediction / W.H. Lee ... [et al.] -- A data integration framework for prediction of transcription factor targets: a BCL6 case study / Matti Nykter ... [et al.] -- Inferring direct regulatory targets of a transcription factor in the DREAM2 challenge / Vinsensius B. Vega ... [et al.] -- A probabilistic graph-theoretic approach to integrate multiple predictions for the protein-protein subnetwork prediction challenge / Hon Nian Chua ... [et al.] -- Replaying the evolutionary tape: biomimetic reverse engineering of gene networks / Daniel Marbach, Claudio Mattiussi, Dario Floreano -- Inferring gene networks: dream or nightmare?: part 1: challenges 1 and 3 / Angela Baralla, Wieslawa I. Mentzen, Alberto de la Fuente -- NIRest: a tool for gene network and mode of action inference / Mario Lauria, Francesco Iorio, Diego di Bernardo -- Reverse engineering of gene networks with LASSO and nonlinear basis functions / Mika Gustafsson ... [et al.] -- Prediction of pairwise gene interaction using threshold logic / Tejaswi Gowda, Sarma Vrudhula, Seungchan Kim -- Inferring gene networks: dream or nightmare?: part 2: challenges 4 and 5 / Alan Scheinine ... [et al.] -- Inference of regulatory gene interactions from expression data using three-way mutual information / John Watkinson ... [et al.]
Description based on print version record
鏈接 Also issued in print: challenges of systems biology. Boston, Mass. : Published by Blackwell Pub. on behalf of the New York Academy of Sciences, 2009 9781573317511 (OCoLC)301885571
主題 Systems biology -- Congresses
Systems Biology
Gene Regulatory Networks
Alt Author Stolovitzky, Gustavo
Kahlem, Pascal
Califano, Andrea
European Network of Excellence (ENFIN)
Dialogue for Reverse Engineering Assessments and Methods (DREAM)
DREAM2 Conference (2007 : New York, N.Y.)
ENFIN-DREAM Conference (2008 : Madrid, Spain)
Record:   Prev Next